BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B12LP1|AL427125
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig300 1537 0.0
3x_Contig1343 262 7e-70
>3x_Contig300
Length = 1281
Score = 1537 bits (773), Expect = 0.0
Identities = 781/783 (99%), Gaps = 1/783 (0%)
Strand = Plus / Plus
Query: 3 cgctggacagagggaggtgactctaactttaattagctgatcctttgttattgctgctta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cgctggacagagggaggtgactctaactttaattagctgatcctttgttattgctgctta 558
Query: 63 acctctgtttatgtagactaacaagattgacgctcgagaggcagagtttcaaggaactaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acctctgtttatgtagactaacaagattgacgctcgagaggcagagtttcaaggaactaa 618
Query: 123 gctctgcaaactgttcaacttctgagtgtccttaacgttcttttcattaagagggcctac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gctctgcaaactgttcaacttctgagtgtccttaacgttcttttcattaagagggcctac 678
Query: 183 ttctcctctgtttttcgaaatagggtactgagtcgtggcctagttttggatattctgaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttctcctctgtttttcgaaatagggtactgagtcgtggcctagttttggatattctgaat 738
Query: 243 ggttcgcatctttggttgttgccattatgtatatggatgagacagaagtagccccgtcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggttcgcatctttggttgttgccattatgtatatggatgagacagaagtagccccgtcaa 798
Query: 303 cggatcttaatagcaagtagaatgcatgactttgagttctttgatgtgctggatgggagt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cggatcttaatagcaagtagaatgcatgactttgagttctttgatgtgctggatgggagt 858
Query: 363 yttctttccggaaagtgtatcaaatcgagctcggtcatctcgttgtcattttaccgcagt 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tttctttccggaaagtgtatcaaatcgagctcggtcatctcgttgtcattttaccgcagt 918
Query: 423 atattcctaaacactgtgtaggccctatggg-cagttatcacttgggtaaaaccatactg 481
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 919 atattcctaaacactgtgtaggccctatgggccagttatcacttgggtaaaaccatactg 978
Query: 482 cagacatcttttgtataaaattctctaattacctctatatttcttgtctatgtagtgcgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 cagacatcttttgtataaaattctctaattacctctatatttcttgtctatgtagtgcgt 1038
Query: 542 aatttggttaattatcagtgaacaactaactgatttaattcatgaaaatgacatggtcct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 aatttggttaattatcagtgaacaactaactgatttaattcatgaaaatgacatggtcct 1098
Query: 602 gtatcatgatgagttaccttcccccaaacattgtatatcaaatttaggctaaaccgtagt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 gtatcatgatgagttaccttcccccaaacattgtatatcaaatttaggctaaaccgtagt 1158
Query: 662 ttggtaggaacagtcaatggaaggaaatgttgcgtaaagtttcagttcgtaatacttatg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 ttggtaggaacagtcaatggaaggaaatgttgcgtaaagtttcagttcgtaatacttatg 1218
Query: 722 gatactaatatattaagatttatacttttcaatggtaagaaaatagaaagagatgttaaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 gatactaatatattaagatttatacttttcaatggtaagaaaatagaaagagatgttaaa 1278
Query: 782 taa 784
|||
Sbjct: 1279 taa 1281
>3x_Contig1343
Length = 6877
Score = 262 bits (132), Expect = 7e-70
Identities = 142/146 (97%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 826 aacaaacggattggattttcgacgtaaaccaaatcgaaggaatcagcagcmccgaaaaca 885
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 aacaaacggattggattttcgacgtaaaccaaatcgaaggaatcagcagcaccgaaaaca 60
Query: 886 gcyttgtccatcacagaaccgcttgggagcagcaatgtacttgacaccggatctaacagc 945
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 gccttgtccatcacagaaccgctt-ggagcagcaatgtacttgacaccggatctaacagc 119
Query: 946 yctgtagacgttatctgggaatggga 971
|||||||||||||||||||||||||
Sbjct: 120 tctgtagacgttatctgggaatggga 145
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6460
Number of Sequences: 1807
Number of extensions: 6460
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)